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Form 5329
Form 5329

Form 5329Additional Taxes on Qualified Plans (Including IRAs) and Other Tax-Favored Accounts

41 — Excess HSA Contributions Updated for tax year 2025

Does this apply to you?

  • You contributed more than the annual HSA limit for your coverage type
  • You made HSA contributions during months when you were not enrolled in a high-deductible health plan
  • You had employer HSA contributions that, combined with your own, exceeded the annual limit
  • You had excess HSA contributions from a prior year that remain uncorrected

Easy to overlook

Employer contributions count toward your HSA limit If your employer contributed $2,000 to your HSA and you contributed $3,000, your total is $5,000. For self-only coverage with a $4,300 limit, you have a $700 excess. Filers who max out their own contributions without accounting for employer deposits trigger the 6% penalty. Check your W-2 Box 12, code W, for the combined employer and employee contribution total. 1 IRS Publication 969 — Health Savings Accounts

The contribution limit is prorated if you were not HSA-eligible all year If you enrolled in a high-deductible health plan partway through the year, your HSA contribution limit is prorated by the number of months you had eligible coverage. Enrolling in July gives you 6/12 of the annual limit. The last-month rule is an exception — if you are HSA-eligible on December 1, you can contribute the full annual amount, but you must remain eligible through the following December or face taxes and penalties. 2 IRS Form 5329 instructions — Part VII

Watch out for this

Ignoring the 6% penalty because HSA excess contributions seem small. A $500 excess costs only $30 per year in penalties, so filers sometimes let it ride. But the 6% penalty recurs every year the excess remains in the account. Over five years, that $500 excess costs $150 in penalties. Withdrawing the excess before the filing deadline eliminates the penalty entirely.

Footnotes

  1. IRS Publication 969, Health Savings Accounts, Contribution Limits. https://www.irs.gov/pub/irs-pdf/p969.pdf

  2. IRS Form 5329 Instructions, Part VII. https://www.irs.gov/instructions/i5329

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